Table 2.

Number of SNPs and InDels identified in three Philippine mango species

Reference genome	Variant	Huania	Pahob	Carabaoc
Alphonso	SNPs	3,826,194	2,918,359	2,355,481
	Insertions	261,867	236,119	199,857
	Deletions	265,002	238,285	199,929
	Total	4,353,063	3,392,763	2,755,267
Tommy Atkins	SNPs	3,777,813	2,990,377	2,448,630
	Insertions	242,643	223,650	197,129
	Deletions	256,831	235,890	206,721
	Total	4,277,287	3,449,917	2,852,480

^aM. odorata, ^bM. altissima, ^cM. indica