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. 2022 Jan 11;23(2):bbab551. doi: 10.1093/bib/bbab551

Table 5.

The balanced independent test datasets for seven species

Type Species Dataset name TATA Number of promoters Number of non-promoters Location Length
Prokaryotic E. coli  Inline graphic E. coli-I 1089 1089 [−60, +20] 81
E. coli E. coli-II 48 48 [−60, +20] 81
B. subtilis B. subtilis 283 283 [−60, +20] 81
Eukaryotic H. sapiens H. sapiens-I TATA-containing 229 229 [−200, +50], [−249, +50], [−500, +500] 251, 300, 1001
H. sapiens-II TATA-less 1328 1328 [−200, +50], [−249, +50], [−500, +500] 251, 300, 1001
R. norvegicus R. norvegicus-I TATA-containing 456 456 [−200, +50], [−249, +50], [−500, +500] 251, 300, 1001
R. norvegicus-II TATA-less 3834 3834 [−200, +50], [−249, +50], [−500, +500] 251, 300, 1001
D. melanogaster D. melanogaster-I TATA-containing 207 207 [−249, +50], [−500, +500] 300, 1001
D. melanogaster-II TATA-less 1153 1153 [−249, +50], [−500, +500] 300, 1001
A. thaliana A. thaliana-I TATA-containing 474 474 [−200, +50], [−249, +50], [−500, +500] 251, 300, 1001
A. thaliana-II TATA-less 1073 1073 [−200, +50], [−249, +50], [−500, +500] 251, 300, 1001
Z. mays Z. mays-I TATA-containing 3051 3051 [−200, +50], [−249, +50], [−500, +500] 251, 300, 1001
Z. mays-II TATA-less 13813 13813 [−200, +50], [−249, +50], [−500, +500] 251, 300, 1001