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. 2020 Jul 7;5:162. [Version 1] doi: 10.12688/wellcomeopenres.16063.1

Table 9. Quantitative reverse transcription-PCR (qRT-PCR) cycling conditions for detection of SARS-CoV-2 RNA using four assays.

Step Berlin Charité (E, N and
RdRP)
EVAg (E and RdRp) BGI
(ORF1ab)
DAAN
(ORF1ab
and N)
QuantiFast
RT-PCR +R
TaqMan ® Fast
Virus
QuantiFast
RT-PCR +R
TaqMan ® Fast
Virus
Kit
component
Kit
component
Reverse transcription 55°C 50°C 55°C 50°C 50°C 50°C
20 min 5 min 20 min 5 min 20 mins 15 mins
Activation 95°C 95°C 95°C 95°C 95°C 95°C
5 min 20 sec 5 min 20 sec 10 mins 15 mins
Denaturation 95°C 95°C 95°C
15 sec
45 cycles
95°C 95°C 94°C
15 sec 3 sec 3 sec 15 sec 15 sec
45 cycles 40 cycles 40 cycles 40 cycles 45 cycles
Annealing and
extension
58°C 60°C 58°C 58°C 60°C 55°C
30 sec 30 sec 45 sec 45 sec 30 sec 45 sec
45 cycles 40 cycles 40 cycles 40 cycles 40 cycles 45 cycles