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Effect sizes of the position weights in the pretrained and non-pretrained models. To investigate the effect size, i.e. the difference in the position weights between the preferred nucleotides-including samples and the not-including ones, we calculated the effect size (Cohen’s d) at each position in both the models: the Rosa chinensis-fine-tuned, Fragaria vesca-pretrained model (red line) and the R. chinensis-trained model without any pretraining (blue line).
