Table 3.
Mainly Pathway Terms of the THOCs and Their 20 Related Genes in HCC Patients (WebGestalt)
| Category | Pathway ID | Pathway Name | Size | Overlap | Enrichment Ratio | P-value | FDR |
|---|---|---|---|---|---|---|---|
| KEGG | hsa03013 | RNA transport | 166 | 9 | 30.32391 | 8.98E-13 | 2.93E-10 |
| KEGG | hsa03040 | Spliceosome | 133 | 6 | 25.23193 | 5.17E-08 | 8.43E-06 |
| KEGG | hsa03015 | mRNA surveillance pathway | 91 | 4 | 24.58495 | 1.51E-05 | 0.001637 |
| Reactome | R-HSA-72203 | Processing of Capped Intron-Containing Pre-mRNA | 243 | 14 | 30.39959 | 0 | 0 |
| Reactome | R-HSA-72202 | Transport of Mature Transcript to Cytoplasm | 83 | 12 | 76.28675 | 0 | 0 |
| Reactome | R-HSA-159236 | Transport of Mature mRNA derived from an Intron-Containing Transcript | 74 | 12 | 85.56486 | 0 | 0 |
| Reactome | R-HSA-109688 | Cleavage of Growing Transcript in the Termination Region | 67 | 13 | 102.3799 | 0 | 0 |
| Reactome | R-HSA-73856 | RNA Polymerase II Transcription Termination | 67 | 13 | 102.3799 | 0 | 0 |