Table 4.

Variable site analyses in the chloroplast genomes of Ilex species

Region	Total number of sites	Polymorphic sites	Singleton variable sites	Parsimony informative sites	Nucleotide diversity
LSC	88,362	2182	1200	982	0.00384
IRa	26,162	94	57	37	0.00055
SSC	18,460	582	319	263	0.00498
IRb	26,167	89	54	35	0.00050
Plastome	159,151	2947	1630	1317	0.00286