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. Author manuscript; available in PMC: 2022 Jul 1.
Published in final edited form as: Nat Microbiol. 2021 Dec 14;7(1):108–119. doi: 10.1038/s41564-021-01019-2

Figure 1. SDSI+AmpSeq Protocol.

Figure 1.

Illustrative workflow for 96 samples through the SDSI+AmpSeq amplicon-sequencing pipeline. A unique, synthetic DNA spike-in (SDSI) will be added to each cDNA sample to allow for contamination tracking and accurate sample identification in analysis. Asterisks indicate additional steps to the standard ARTIC pipeline.