Table 6.
Genotypes for polymorphisms in the accD-psaI region (58,173–59,596 bp)
| Sample name | accD-psal SNP1 (A/G) | accD-psal SNP3 (A/C) | SNPa (G/A) | SNPa (T/C) | accD-psal SNP2 (T/G) | accD-psal STR (A) |
|---|---|---|---|---|---|---|
| Start location (bp) | 58833 | 58851 | 58921 | 58924 | 58981 | 59141 |
| Yoruba Nigeria (NC_027223.1) | A | A | G | T | T | 10 |
| H2-4 | A | A | G | T | T | 10 |
| H3-3 | A | A | G | T | T | 10 |
| H5-4 | G | A | G | T | G | 11 |
| NT H5-1 | A | A | G | T | T | 10 |
| NT H5-2 | G | A | G | T | G | 11 |
| NT H5-4 | G | C | G | T | T | 10 |
| H8-1 | G | A | G | T | G | 11 |
| 10-A1 | G | A | G | T | G | 11 |
| 12-A7 | G | A | G | T | G | 11 |
| 16-B1 | G | C | A | C | T | 10 |
| 21-A16 | G | A | G | T | G | 11 |
| 35 | G | C | A | C | T | 10 |
| 41 | G | C | A | C | T | 10 |
| MedMJ10 | G | A | G | T | G | 11 |
Italics indicate polymorphisms not analyzed previously by CE
a Indicates new polymorphisms discovered in this study