Table 3.
Functional categories of up-regulated genes in chromosome 6p21-22.
| Cell Line | Genes and GenBank Accession No. | Functionally Category |
|---|---|---|
| H1299 | histone 1, H1c (HIST1H1C) [NM_005319] | Member of the histoneH1 family |
| histone 1, H1d (HIST1H1D) [NM_005320] | Member of the histoneH1 family | |
| histone 1, H2bg (HIST1H2BG) [NM_003518] | Member of the histoneH2B family | |
| histone 1, H2bf (HIST1H2BF) [NM_003522] | Member of the histoneH2B family | |
| histone 1, H2bc (HIST1H2BC) [NM_003526] | Member of the histoneH2B family | |
| histone 1, H2be (HIST1H2BE) [NM_003523] | Member of the histoneH2B family | |
| histone 1, H2ad (HIST1H2AD) [NM_021065] | Member of the histoneH2A family | |
| histone 1, H2bh (HIST1H2BH) [NM_003524] | Member of the histoneH2B family | |
| histone 1, H2bd (HIST1H2BD) transcript variant 1, [NM_021063] | Member of the histoneH2B family | |
| histone 1, H2bb (HIST1H2BB) [NM_021062] | Member of the histoneH2B family | |
| histone 1, H3b (HIST1H3B) [NM_003537] | Member of the histoneH3 family | |
| histone 1, H1e (HIST1H1E) [NM_005321] | Member of the histoneH1 family | |
| immediate early response 3 (IER3), transcript variant short [NM_003897] | Protect cells from apoptosis | |
| histone 1, H2bi (HIST1H2BI) [NM_003525] | Member of the histoneH2B family | |
| major histocompatibility complex, class I, C (HLA-C) [NM_002117] | Operate in the immune system | |
| major histocompatibility complex, class I, B (HLA-B) [NM_005514] | Operate in the immune system | |
| major histocompatibility complex, class I, F (HLA-F) [NM_018950] | Operate in the immune system | |
| histone 1, H4c (HIST1H4C) [NM_003542] | Member of the histoneH4 family | |
| histone 1, H2bk (HIST1H2BK) [NM_080593] | Member of the histoneH2B family | |
| histone 1, H2ae (HIST1H2AE) [NM_021052] | Member of the histoneH2A family | |
| histone 1, H2bn (HIST1H2BN) [NM_003520] | Member of the histoneH2B family | |
| histone 1, H2bl (HIST1H2BL) [NM_003519] | Member of the histoneH2B family | |
| histone 1, H2bo (HIST1H2BO) [NM_003527] | Member of the histoneH2B family | |
| histone 1, H2bj (HIST1H2BJ) [NM_021058] | Member of the histoneH2B family | |
| histone 1, H2bm (HIST1H2BM) [NM_003521] | Member of the histoneH2B family | |
| MCF7 | progastricsin (pepsinogen C) (PGC), transcript variant 1 [NM_002630] | * |
| ets variant 7 (ETV7) [NM_016135] | Cellular processes on development and differentiation | |
| proteasome (prosome, macropain) subunit, beta type, 8 [NM_004159] | Processing of class I MHC peptides | |
| major histocompatibility complex, class II, DP beta 1 (HLA-DPB1), [NM_002121] | Operate in the immune system | |
| transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) (TAP1), [NM_000593] | Multi-drug resistance | |
| ubiquitin D (UBD) [NM_006398] | Many cellular processes | |
| cDNA FLJ37399 fis, clone BRAMY2027587. [AK094718] | Tumor suppressor function | |
| BE004814 MR2-BN0114-020500-006-e07 BN0114 H [BE004814] | * | |
| cytidine monophosphate-N-acetylneuraminic acid hydroxylase [NR_002174] | * |
* Genes whose functional categories are unknown.