Table 5.

The interactions involved docking the epitope HLGYKCSIRK with its corresponding MHC allele(HLA-A*03:01).

Type of Interaction	Amino Acid (Position)	Bond Length (Angstrom)
Conventional Hydrogen Bonds	ASP77	2.15 Å
	ASP77	1.69  Å
	TRP147	1.89  Å
	LYS146	1.65  Å
	GLU152	2.61  Å
	GLU152	2.32  Å
	ARG114	2.00  Å
	ARG114	1.76 Å
	GLN70	1.84 Å
	GLN155	1.68 Å
	GLN155	1.71 Å
	THR163	3.01 Å
	GLU63	2.04 Å
Hydrophobic Interactions	TYR84	5.29 Å 3.76 Å 4.74 Å
	LYS146	3.76  Å
	ALA69	4.74  Å
	PHE9	5.23  Å
	TYR99	5.46 Å
	TYR7	5.36 Å
	LEU	4.96 Å
Salt Bridge, attractive charge interactions	GLU152 ASP77	1.89 Å 2.87 Å
	GLU152	5.04 Å
	GLU152	2.74 Å
Donor-Donor Clash	THR143	1.30 Å
	TYR99	2.50 Å
Cation-Pi Interaction	LYS146	4.32 Å
	TRP147	4.36 Å
Carbon Hydrogen Bond	LEU156	3.53 Å
Pi Donor Hydrogen Bond	TYR84	2.34 Å