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. 2022 Mar 3;12:836821. doi: 10.3389/fonc.2022.836821

Table 8.

Available sets of MHC class II-restricted neoantigens validated to elicit a CD4+ T cell response.

Author and Year Tumor Type Neoantigens Tested : Immunogenic Neoantigens Available Sequencing Data Mutations Tested Prioritization Method Validation Method
Ott et al., 2017 (6) Melanoma 165:80 WES, RNAseq SNVs and small indels NetMHCpan2.4 and oncogene mutations ELISPOT
Sahin et al., 2017 (7) Melanoma 125:60 WES, RNAseq SNVs RNA expression > 10 RPKM and IEDB binding predictions ELISPOT

Datasets were only included if they included a minimum of ten neoantigens.