Table 8.
Author and Year | Tumor Type | Neoantigens Tested : Immunogenic Neoantigens | Available Sequencing Data | Mutations Tested | Prioritization Method | Validation Method |
---|---|---|---|---|---|---|
Ott et al., 2017 (6) | Melanoma | 165:80 | WES, RNAseq | SNVs and small indels | NetMHCpan2.4 and oncogene mutations | ELISPOT |
Sahin et al., 2017 (7) | Melanoma | 125:60 | WES, RNAseq | SNVs | RNA expression > 10 RPKM and IEDB binding predictions | ELISPOT |
Datasets were only included if they included a minimum of ten neoantigens.