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Data analysis pipeline
Overview of the data-analysis pipelines provided with this study, displaying each step in the analysis pipeline and the software used. Some examples of the kinds of figures which can generated with our pipeline are highlighted in the last step. Two versions of the same pipeline are provided, one written in R (left) and one in python via QIIME2 (right), which wraps the individual analysis steps in one software package (created with BioRender.com)
