Table 2.
Gene name | Model | np | LnL | ω2(M2a) | LRTs(2ΔLnL) | LRT p-value | Positive sites |
---|---|---|---|---|---|---|---|
accD | M8 | 36 | − 3560.21 | 4.58 | 7.44 | 2.42E-2 | 190 C* |
M7 | 34 | − 3563.93 | |||||
matK | M8 | 36 | − 3912.79 | 2.97 | 18.03 | 2.76E-4 | 314 Y *, 329 I* |
M7 | 34 | − 3921.81 | |||||
rbcL | M8 | 36 | − 3096.54 | 17.49 | 54.37 | 0 | 219 C**, 225 I*, 262 V**, 328 A** |
M7 | 34 | − 3123.73 | |||||
rpoC1 | M8 | 36 | − 4177.33 | 78.21 | 96.64 | 0 | 91 Q**,150 C**, 436 K* |
M7 | 34 | − 4225.65 | |||||
rpoC2 | M8 | 36 | − 9048.76 | 4.59 | 29.53 | 3.86E-7 | 80 L**, 533 K* 553 L*, 564 D*, 876 P*, 1025 S**, 1035 L*, 1356 L* |
M7 | 34 | − 9063.53 | |||||
ndhK | M8 | 36 | − 1464.89 | 5.06 | 15.38 | 4.57E-4 | 37 Q 0.963*,45 S 0.988* |
M7 | 34 | − 1472.58 | |||||
ndhF | M8 | 36 | − 5328.43 | 7.74 | 8.69 | 1.29E-2 | |
M7 | 34 | − 5332.78 |
*: means P < 0.05, **: means P < 0.01