Extended Data Table 5|.
Template switch sequences, constant region primers and isotype-specific internal constant region sequences for bulk BCR sequencing and processing
| Template switch sequences | |
|---|---|
|
| |
| TS-shift0 | TACGGG |
| TS-shift1 | ATACGGG |
| TS-shift2 | TCTACGGG |
| TS-shift3 | CGATACGGG |
| TS-shift4 | GATCTACGGG |
|
| |
| Constant region primers | |
|
| |
| Human-IGHM | GAATTCTCACAGGAGACGAGG |
| Human-IGHD | TGTCTGCACCCTGATATGATGG |
| Human-IGHA | GGGTGCTGYMGAGGCTCAG |
| Human-IGHE | TTGCAGCAGCGGGTCAAGG |
| Human-IGHG | CCAGGGGGAAGACSGATG |
| Human-IGK | GACAGATGGTGCAGCCACAG |
| Human-IGL | AGGGYGGGAACAGAGTGAC |
|
| |
| Isotype-specific internal constant region sequences | |
|
| |
| Human-IGHA-InternalC | GGCTGGTCGGGGATGC |
| Human-IGHD-InternalC | GAGCCTTGGTGGGTGC |
| Human-IGHE-InternalC | GGCTCTGTGTGGAGGC |
| Human-IGHG-InternalC | GGCCCTTGGTGGARGC |
| Human-IGHM-InternalC | GGGCGGATGCACTCCC |
| Human-IGKC-IGKJ-InternalC | TTCGTTTRATHTCCAS |
| Human-IGLC-1-InternalC | TGGGGTTGGCCTTGGG |
| Human-IGLC-2-InternalC | AGGGGGCAGCCTTGGG |
| Human-IGLC-3-InternalC | YRGCCTTGGGCTGACC |
| Human-IGLC-4-InternalC | GCTGCCAAACATGTGC |