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. 2022 Mar 21;15:99. doi: 10.1186/s13071-022-05232-8

Table 3.

Identification and relative abundance of proteins present in HF samples from E. granulosus and E. ortleppi bovine pulmonary hydatid cysts

Accession numbera Protein name Molecular Massb EG EO
NSAF SD NSAF SD
EgrG_000144400 Abnormal EMBroygenesis family member emb 9 168 kDa 0.00382 0.00227 0.00254 0.00064
EgrG_000061200 Actin 42 kDa 0.01910 0.01909 0.01722 0.00630
EgrG_000156400 Aldo keto reductase family 1 member B4 42 kDa 0.00199 0.00101 0.00277 0.00102
EgrG_000704400 Alpha-mannosidase 118 kDa 0.01298 0.00567 0.01019 0.00120
EgrG_000530400 Amine oxidase 84 kDa 0.00932 0.00324 0.00531 0.00204
EgrG_001032200 Aminotransferase class III; Ornithine aminotransferase 46 kDa 0.01093 0.00898 0.00551 0.00226
EgrG_000184900 Antigen 5 55 kDa 0.04773 0.00409 0.05786 0.02534
EgrG_000575900 Basement membrane specific heparan sulfate 860 kDa 0.01233 0.00292 0.00869 0.00066
EgrG_000701800 Basement membrane specific heparan sulfate 96 kDa 0.00857 0.00187 0.00467 0.00036
EgrG_000879900 Beta D xylosidase 2 92 kDa 0.00252 0.00108 0.00271 0.00146
EgrG_000789900 Beta mannosidase 108 kDa 0.00220 0.00084 0.00115 0.00032
EgrG_000903100 Calsyntenin 1 130 kDa 0.00405 0.00445 0.00285 0.00157
EgrG_000970500 Cathepsin D lysosomal aspartyl protease 47 kDa 0.01626 0.00742 0.01783 0.00509
EgrG_000144350 Collagen alpha 1(IV) chain 172 kDa 0.00553 0.00266 0.00351 0.00066
EgrG_000417600 Collagen alpha 1(IV) chain 182 kDa 0.00280 0.00195 0.00154 0.00066
EgrG_000203400 Collagen alpha 1(V) chain 172 kDa 0.00630 0.00263 0.00512 0.00185
EgrG_000144300 Collagen alpha 1(V) chain 177 kDa 0.00453 0.00246 0.00309 0.00012
EgrG_000729300 Collagen alpha 1(XV) chain 191 kDa 0.00398 0.00232 0.00250 0.00054
EgrG_000823800 Collagen alpha 2(I) chain 131 kDa 0.00914 0.00326 0.00605 0.00239
EgrG_001190600 Collagen type I II III V XI alpha 123 kDa 0.00786 0.00374 0.00445 0.00175
EgrG_000524200 Collagen type XI alpha 2 163 kDa 0.00445 0.00130 0.00191 0.00115
EgrG_000766600 Cysteine-rich secretory protein LCCL domain-containing; Peptidase inhibitor 16 29 kDa 0.01633 0.01258 0.00751 0.00292
EgrG_000255800 EGF domain protein 267 kDa 0.00385 0.00187 0.00193 0.00014
EgrG_000682900 Epididymal secretory protein E1; Niemann Pick C2 protein 20 kDa 0.00778 0.00123 0.00369 0.00151
EgrG_000824000 Estrogen regulated protein EP45 45 kDa 0.01048 0.00136 0.00722 0.00093
EgrG_001061900 Expressed conserved protein 74 kDa 0.00762 0.00602 0.01483 0.00569
EgrG_000412500 Expressed conserved protein 14 kDa 0.01324 0.00948 0.01267 0.00320
EgrG_000523100 Expressed conserved protein 53 kDa 0.00638 0.00255 0.00600 0.00175
EgrG_000596300 Expressed conserved protein 25 kDa 0.01830 0.01295 0.01610 0.00609
EgrG_000316400 Expressed protein 35 kDa 0.00261 0.00088 0.00217 0.00114
EgrG_000842900 Fgfr protein 80 kDa 0.00302 0.00128 0.00273 0.00042
EgrG_001060700 Fibrillar collagen chain FAp1 alpha 116 kDa 0.00989 0.00164 0.00725 0.00357
EgrG_000176400 Fras1 related extracellular matrix protein 263 kDa 0.00187 0.00107 0.00147 0.00037
EgrG_000905600 Fructose-bisphosphate aldolase 40 kDa 0.01739 0.00955 0.01265 0.00119
EgrG_000712600 Gynecophoral canal protein 97 kDa 0.00883 0.00348 0.00577 0.00146
EgrG_000824400 Gynecophoral canal protein; Transforming growth factor-beta-induced protein ig-h3 73 kDa 0.01180 0.00181 0.00923 0.00139
EgrG_000422350 Hemicentin 1 477 kDa 0.00279 0.00100 0.00138 0.00065
EgrG_001132400 Laminin 395 kDa 0.00113 0.00081 0.00054 0.00029
EgrG_000458400 Laminin subunit gamma 163 kDa 0.00254 0.00085 0.00105 0.00044
EgrG_000684200 Lipid transport protein N terminal 344 kDa 0.00439 0.00189 0.00236 0.00186
EgrG_000343000 Neurogenic locus notch protein 339 kDa 0.00555 0.00140 0.00384 0.00030
EgrG_001181950 Papilin 67 kDa 0.00315 0.00094 0.00159 0.00057
EgrG_000920600 Peptidyl-prolyl cis–trans isomerase 17 kDa 0.01078 0.00123 0.01451 0.00122
EgrG_000292700 Phosphoenolpyruvate carboxykinase 71 kDa 0.01145 0.00131 0.01344 0.00424
EgrG_001132700 Poly(U) specific endoribonuclease 29 kDa 0.00748 0.00254 0.00659 0.00084
EgrG_000849600 Proteinase inhibitor I25 cystatin 31 kDa 0.03216 0.01174 0.02514 0.01025
EgrG_001133400 Protein-L-isoaspartate O-methyltransferase 27 kDa 0.00630 0.00374 0.00363 0.00209
EgrG_000929500 SPONdin extracellular matrix glycoprotein 111 kDa 0.00293 0.00178 0.00126 0.00016
EgrG_000381200 Tapeworm specific antigen B (AgB8/1) 10 kDa 0.09772 0.00805 0.19553 0.08363
EgrG_000791700 Thioredoxin peroxidase 21 kDa 0.01305 0.00927 0.01254 0.00268
EgrG_001060600 Type II collagen B 154 kDa 0.00352 0.00080 0.00206 0.00116
EgrG_000317300 Vesicular amine transporter 49 kDa 0.01186 0.00156 0.00688 0.00342

The listed proteins were identified in the three biological replicates from each species. Quantitative data are presented based on averaged NSAF values calculated for E. granulosus (EG) and E. ortleppi (EO)

NSAF Normalized spectral abundance factor, SD standard deviation

aAccording to E. granulosus genome annotation (PRJEB121, version WBPS11) available at WormBase ParaSite

bMolecular mass calculated from primary sequence

Top ten NSAF values in HF samples of each species are highlighted in bold