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. 2022 Mar 9;18(3):e1009960. doi: 10.1371/journal.pcbi.1009960

Table 2. The root mean square error (RMSE), coverage and average length of the posterior 50% equal-tailed intervals, and Effective Sample Size (ESS) for two ARG properties inferred by ARGinfer and ARGweaver.

R Method RMSE 50% credible interval ESS
Coverage Average length
A. Total branch length per site (in generations) 1 ARGinfer 6729 0.44 8300 360
ARGweaver 6620 0.41 7889 317
2 ARGinfer 6191 0.53 8714 1177
ARGweaver 6430 0.52 8496 675
4 ARGinfer 6877 0.51 8827 2478
ARGweaver 6931 0.51 8730 932
B. Number of Ancestral recombination events 1 ARGinfer 9.45 0.49 12.09 171
ARGweaver 9.53 0.54 11.73 565
2 ARGinfer 5.34 0.57 7.57 438
ARGweaver 5.70 0.49 7.35 1086
4 ARGinfer 3.72 0.53 4.78 970
ARGweaver 3.83 0.52 4.67 1398