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. 2022 Mar 7;13:861626. doi: 10.3389/fmicb.2022.861626

TABLE 5.

Mutant genes of H. pylori isolated from 36 patients with unsuccessful prior eradication treatments.

Antibiotic Mutant genes Genotypic resistance testing

PCR, n (%) WGS, n (%)
Clarithromycin 23S rRNA 32 (88.9) 33 (91.7)
Amoxicillin PBP-1A 8 (22.2) 8 (22.2)
Levofloxacin gyrA 17 (47.2) 18 (50.0)
Metronidazole rdxA 16 (44.4) 18 (50.0)
Tetracycline 16S rRNA 0 (NA) 0 (NA)
Furazolidone oorD/porD 0 (NA) 0 (NA)

PCR, polymerase chain reaction; WGS, whole genome sequencing.