TABLE 1.

Quantification by RNAseq of annotated miRNAs differentially expressed in SARS-CoV-ΔE versus SARS-CoV-WT infected mouse lungs^a

		CPM
miRNA	Fold-change	ΔE	WT
mmu-miR-6978-5p	−14.39	0.434	6.255
mmu-miR-331-3p	−3.27	5.333	17.448
mmu-miR-5099	−2.99	21.112	63.119
mmu-miR-33-5p	−2.98	90.824	269.660
mmu-miR-223-3p	−2.85	56.689	161.456
mmu-miR-296-5p	−2.64	1.613	4.257
mmu-miR-223-5p	−2.43	15.032	36.504
mmu-miR-3102-3p	−2.40	25.457	60.969
mmu-miR-145a-5p	−2.23	168.897	377.413
mmu-miR-107-3p	2.01	1782.888	891.444
mmu-miR-320-3p	2.02	21395.207	10623.710
mmu-miR-150-3p	2.05	115.360	56.103
mmu-miR-30c-1-3p	2.06	44.017	21.407
mmu-miR-760-3p	2.11	19.027	9.000
mmu-miR-351-3p	2.39	70.035	29.243
mmu-miR-3474	2.72	16.111	5.938
mmu-miR-5107-5p	2.73	5.560	2.035
mmu-miR-877-5p	2.88	80.171	27.761
mmu-miR-378d	3.17	29.243	9.254
mmu-miR-128-3p	3.29	3.555	1.079
mmu-miR-3572-5p	3.31	14.672	4.423
mmu-miR-483-5p	3.88	7.516	1.932
mmu-miR-184-3p	4.86	133.436	27.474

^aAnnotated miRNAs with FC > 2 or < −2, FDR < 0.05, and a number of raw counts > 20 in average are shown.