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. 2022 Mar 23;9:96. doi: 10.1038/s41597-022-01236-2

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© The Author(s) 2022

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 2 — Quality control and cell filtering. Box plots of (a) the library sizes and (b) the numbers of detected genes for all the cells in each of the 69 samples before filtering. Boxes show median and quartiles and whiskers show minimum and maximum. Boxes are colored by tumor type. (c) Number of cells in each of the 69 samples. Blue segments show the number of cells that are kept after the cell filtering while red segments show filtered cells. The proportion of filtered cells is labelled on top of each bar.