Table 1.
Set * | Nodes | Edges | Density | Clusters | Modularity | Average Degree | ACC | Diameter | Nodes after Sc. ** |
Edges after Sc. ** |
---|---|---|---|---|---|---|---|---|---|---|
THPs | 528 | 4452 | 0.023 | 10 | 0.47 | 16.864 | 0.428 | 8 | - | - |
Outliers | 99 | 2691 | 0.891 | 3 | 0.13 | 54.364 | 0.733 | 3 | 34 | 384 |
* Density, number of clusters, and modularity were calculated in the starPep toolbox, while average degree, ACC, and diameter were calculated in Gephi. ** Sc.: Scaffold extraction.