2-HG	2-HydroxyGlutarate
5-caC	5-Carboxylcytosine
5-fC	5-Formylcytosine
5-hmC	5-HydroxymethylCytosine
5-mC	5-MethylCytosine
ACF	ATP-utilizing Chromatin Assembly and Remodeling Factor
ALKBH5	α-Ketoglutarate-dependent dioxygenase alkB Homolog 5
AML	Acute Myeloid Leukemia
APC	Adenomatous Polyposis Coli
Arg	Arginine
ARID1A	AT-Rich Interaction Domain 1A
ATG	Autophagy Related
BAF	BRG1/BRM Associated Factor
Bcl-2	B-Cell Lymphoma 2
BET	Bromodomain and Extraterminal Domain
BNIP3	BCL2 Interacting Protein 3
BPTF	Bromodomain PHD Finger Transcription Factor
BRCA	Breast Cancer
Brg1	Brahma-Related Gene 1
CA9	Carbonic Anhydrase 9
CCND2	Cyclin D2
CCT4	Chaperonin-Containing tailless complex polypeptide, subunit 4
CDC37	Cell Division Cycle 37
CDH1	Cadherin 1
CDH3	Cadherin 3
CDKN2A	Cyclin Dependent Kinase Inhibitor 2A
CERF	CECR2-Containing Remodeling Factor
CGIs	CpG Islands
CHD	Chromodomain-Helicase-DNA-binding protein
CHRAC	Chromatin Accessibility Complex
CML	Chronic Myeloid Leukemia
COX2	Cyclooxygenase 2
CRC	Colorectal Cancer
CTHRC1	Collagen Triple Helix Repeat Containing 1
DAMP	Damage-associated molecular pattern
DAPK	Death associated protein kinase 1
DGGR8	DiGeorge syndrome critical region gene 8
DLBCL	Diffuse Large B-Cell Lymphoma
DMRs	Differentially Methylated Regions
DNA	Deoxyribonucleic Acid
DNMT	DNA MethylTransferases
DOT1L	Disruptor of Telomeric silencing 1-Like
EGFR	Epidermal Growth Factor Receptor
EMT	Epithelial-Mesenchymal Transition
ER	Estrogen Receptor
ERCC1	Excision Repair Cross-Complementation Group 1
ERK	Extracellular signal-Regulated Kinase
ERV	Endogenous Retro-Viruses
ESCC	Esophageal Squamous Cell Carcinoma
EZH2	Enhancer of Zeste Homolog 2
FHIT	Fragile Histidine Triad diadenosine triphosphatase
FTO	Fat-mass and obesity associated protein
GDHO	Global DNA Hypomethylation
GNAT	GCN5-related N-acetyl transferases
GSTP1	Glutathione S-Transferase P1
H	Histone
HAT	Histone Acetyl Transferase
HATi	HAT inhibitor
HCAs	Heterocyclic Amines
HCC	Human hepatocellular Cancer
HDAC	Histone Deacetylases
HDM	Histone Demethylases
HIF	Hypoxia-Inducible Factor
HK2	Hexokinase 2 Enzyme
hMLH1	Human MutL Homolog 1
HMMR	Hyualuronan-Mediated Motility Receptor
hMSH2	Human MutS Homolog 2
HMT	Histone Methyltransferases
HNRNP	Heterogeneous Nuclear Ribo-Nucleo-Proteins
HNSCC	Head and Neck Squamous Cell Carcinoma
hOGG1	Human 8-Oxoguanine DNA N-Glycosylase 1
HOTAIR	Hox Transcript Antisense RNA
HOXA5	Homeobox A5
hOXC	Human homeobox C
HRAS	Harvey Rat Sarcoma viral oncogene homolog
HSP90	Heat Shock Protein 90
HSPGs	Heparan Sulfate ProteoGlycans
hTERT	Human Telomerase Reverse Transcriptase
IDH1	Isocitrate Dehydrogenase NADP+1
IGF2BPs	Insulin-like Growth Factor 2 mRNA-Binding Proteins
IL10	Interleukin 10
IL11	Interleukin-11
INO80	Inositol requiring 80
ISWI	Imitation switch
K	Lysines
KDM	Lysine-Specific Demethylase
KG	Ketoglutarate
KMT	Lysine-specific Methyltransferase
let-7a	Lethal-7a
lincRNA	Large Intergenic Non-Coding RNA
LINES	Long interspersed transposable elements
lncRNA	Long non coding RNA
LSD	Lysine-Specific Demethylases
Lys	Lysine
m6A: N6	Methyladenosine
MALAT1	Metastasis-Associated Lung Adenocarcinoma Transcript 1
MAPK	Mitogen-Activated Protein Kinase
MBD	Methyl Binding Protein
MBPs	Methyl-CpG Binding Proteins
MCRS1	Microspherule protein 1
MDR1	Multi-Drug Resistance 1
MECP	Methyl CpG binding Protein 2
MEF2	Myocyte Enhancer Factor 2
METTL	Methyltransferase-Like Protein
MGMT	O6-Methylguanine-DNA Methyltransferase
miRNA	Micro RNA
mRNAs	Messenger RNAs
MTA	Metastasis-Associated Gene
MTOR	Mammalian Target of Rapamycin
MyoD	Myogenic Activator
NCR	Natural Cytotoxicity Receptor
ncRNAs	Non-coding RNAs
NF-κB	Nuclear Factor Kappa light chain enhancer of activated B cells
NK	Natural Killer
NoRC	Nucleolar-Remodeling Complex
NSCLC	Non-Small-Cell Lung Cancer
NuRD	Nucleosome-Remodeling Deacetylase
NURF	Nucleolar-Remodeling Factor
PAX2	Paired box 2
PDCD4	Programmed Cell Death 4
PI3K	Phosphoinositide 3-Kinase
piRNA	PIWI-interacting RNA
PRC2	Polycomb Repressive Complex 2
PTEN	Phosphatase and Tensin Homolog
PTM	Post-Transcriptional Modifications
R	Arginine
RB gene	Retinoblastoma gene
RB1	RB transcriptional corepressor 1
RBBP	Retinoblastoma Binding Protein
RBM15	RNA-Binding Motif protein 15
RBM15B	RNA-Binding Motif protein 15B
RISC	RNA Induced Silencing Complex
RNA	Ribonucleic Acid
ROD1	Regulator of Differentiation 1
ROS	Reactive Oxygen Species
rRNAs	Ribosomal RNAs
RSF	Remodeling and Spacing Factor
RUVBL1	RuvB Like AAA ATPase 1
RUVBL2	RuvB Like AAA ATPase 2
S	Serine
SAM	S-Adenosyl-Methionine
Ser	Serine
SERPINE2	Serpin family E member 2
SINES	Short Interspersed Transposable Elements
SIRT	Sirtuin
SNF2H	Sucrose Non-Fermenting 2 Homologue
SNF2L	Sucrose Non-Fermenting 2 Like
sno-RNA	Small Nucleolar RNA
STAT3	Signal Transducer and Activator of Transcription 3
SWI/SNF	Switching defective/sucrose nonfermenting
TDG	Thymine-DNA glycosylase
TE	Transposable elements
TET	Ten eleven translocation
TET2	TET methylcytosine dioxygenase 2
TGF-β1	Transformting growth factor beta 1
Thr	Threonine
TLS	Translocated in liposarcoma
TOP2A	Topoisomerase II α
tRNAs	Transfer RNAs
TSS	Transcription Start Site
T-UCR	Transcribed Ultraconcerved Regions
TUG1	Taurine-Upregulated Gene 1
Tyr: T	Tyrosine
Tyr	Tyrosine
UHRF1	Ubiquitin like with PHD and Ring Finger domains 1
UTR	Untranslated region
VEGF	Vascular Endothelial Growth Factor
VHL	Von Hippel-Lindau syndrome
VIRMA	Vir-like m6A Methyltransferase Associated
WNT	Wingless
WRN	Werner syndrome protein
WTAP	Wilms Tumor 1-Associated Protein
WWOX	WW Domain Containing Oxidoreductase
Xi	Inactive X chromosome
XIC	X Chromosome Inactivation
Xic	X-Inactivation Center
XRCC1	X-Ray Repair Cross-Complementing 1
YTH	YT521-B Homology
YTHDF2	YTH N6-Methyladenosine RNA binding protein 2
YY1	Yin Yang 1
ZC3H3	Zinc finger CCCH domain-containing protein 13