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. 2022 Apr 1;13(2):329–339. doi: 10.14336/AD.2021.1113

Table 1.

Differential expression of circular RNA in IS.

Disease type Model Detection method Change of expression profile Specific core CircRNAs Possible major biological processes and functions Possible major signaling pathways/pathophysiological processes (target genes) Refs.
Ischemic stroke Mouse tMCAO model Microarray analysis and qRT-PCR 1320 CircRNA differentially expressed (among them, 283 cases changed at least one reperfusion time point (> two times), 16 cases changed at all three reperfusion time points) Three up (Circ_008018, Circ_015350, Circ_ 016128); three down (Circ_011137, Circ_001729, Circ_006696) Biological regulation, metabolic processes, cellular communication, and binding to proteins, ions, and nucleic acids Mitogen-activated protein kinase signal, cell cycle, actin cytoskeleton regulation, and local adhesion Mehta SL et al. [17]
Mouse tMCAO model Microarray analysis and qRT-PCR 1027 CircRNA were differentially expressed, of which 914 were upregulated, and 113 were significantly downregulated mmu_CircRNA_40001 mmu_CircRNA_013120 mmu_CircRNA_4080 Multiple biological processes, cellular signaling pathways, and protein activity Ten paths, the first two were Rap1 signal pass and Hippo path Liu C et al. [18]
Peripheral blood of 80 AIS patients with different etiologies Microarray analysis and qRT-PCR 1) Atherosclerotic and thrombotic stroke: 219 differential expressions; 2) Atherosclerosis and undetermined stroke: 87 upregulated and 139 downregulated; 3) Patients with thrombotic stroke and unconfirmed stroke: eight were upregulated, and nine were downregulated HSA_CircRNA_102488 Differentially expressed CircRNAs interact primarily with a group of stroke-related miRNAs, including fatty acid biosynthesis, lysine degradation, arrhythmogenic right ventricular cardiomyopathy, or hypertrophic cardiomyopathy (HCM) The RBP sites of hsa_CircRNA_102488 were clustered around AGO2 and FUS proteins Aiora et al.[3]
Mouse tMCAO model and peripheral blood of patients with AIS Microarray analysis and qRT-PCR There were 128,198,789 CircRNA changes at 5 min, 3 h, and 24 h after IS, respectively CircBBS2, CircPHKA2 The biological processes related to stroke include immune process, metabolic process, and biological adhesion Hippo signal Pathway, extracellular Matrix-receptor interaction, and Fatty Acid Metabolism Lu D et al. [19]
Permanent distal MCAO model in mice (non-ischemic ipsilateral thalamus) Microarray analysis and qRT-PCR 2659 CircRNAs were differentially expressed (among them, 73 CircRNAs were significantly changed at seven and 14 days after stroke) mmu_Circ:chr2:74568941-74573626, mmu_Circ: chr8:8639206-8639489, mmu_Circ:chr18:14633543-14636618 Closely related to inflammation and self-repair, CircRNA plays an important role in secondary thalamic nerve degeneration and remodeling after focal cortical infarction Metabolic pathway, cancer pathway, PI3K-Akt signal pathway, endocytosis, mitogen-activated protein kinase signal pathway, Ras signal pathway, proteoglycan in cancer, Rap1 signal pathway, local adhesion, axon guidance, and other pathways Li f et al. [25]
PBMCs in AIS patients HTS and qRT-PCR 521 Circ RNA differentially expressed (including 373 upregulated and 148 downregulated) Four up (hsa_cic:chr1:95609447-95616975, hsa_cic:chr15:55640530-55640923); four down (hsa_cic:chr9:80869752-80879232) Neuroinflammation and neuroimmunity The pathways involved include metabolic pathways, mitogen-activated protein kinase signaling pathways, some inflammatory pathways, immune pathways, differentiation, and apoptosis-related signaling pathways Dong Z et al. [20]
OGD/R treatment of mouse hippocampal HT22 cells Microarray analysis and QRT-PCR Three upregulated and 12 downregulated mmu-CircRNA-015947 - Apoptosis, metabolism, and immune-related pathways Lin SP et al. [24]
Rat MCAO model (six left hemispheric brain tissues) HTS and qRT-PCR 40 upregulated and 47 downregulated (four days after MCAO) Three up (CircRNA.17737,CircRNA.8828,CircRNA.14479); three down (CircRNA.1059,CircRNA.9967, CircRNA.6952) Nervous system development and endocytosis Cytoplasmic vesicles, vesicles, synapses, cytoskeletons, cytoplasmic vesicles Duan X et al. [21]
Three AIS patients and three normal healthy controls Microarray analysis and qRT-PCR 2270 CircRNAs were differentially expressed, of which 659 CircRNAs were upregulated, and 1611 were downregulated hsa_Circ_0005548 significantly upregulated, hsa_Circ_0000607 and hsa_Circ_0002465 decreased significantly, hsa_Circ_0000607/mir-337-3p/BCL2 axis - Endocytosis, energy metabolism, apoptosis, FOXO signaling pathway, platelet activation, neurotrophic factor signaling pathway, and VEGF signaling pathway LiS et al. [22]
Five LAA stroke patients and four controls Microarray analysis and qRT-PCR 182 CircRNAs upregulated and 176 downregulated hsa_CircRNA_0001599 - Chromatin modification, autophagy, platelet activation, and neural precursor cell proliferation Li S et al. [23]