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. 2022 Feb 14;109(3):471–485. doi: 10.1016/j.ajhg.2022.01.014

Table 1.

Summary of top six independent SNP-cytokine loci

Loci SNPs Chr Base pair Cytokines Stimulation p value Causal genes
1 rs12169244 22 47,558,596 IL-1b S. enteritidis 1.74 × 10−8 TBC1D22Aa
2 rs9563018 13 51,656,046 IL-1b M. tuberculosis 7.81 × 10−8 LINC0037,aGUCY1B2b
3 rs4474665 16 17,498,563 IFN-g S. enteritidis 7.99 × 10−8 XYLT1a
4 rs74115411 1 153,331,776 IL-6 S. aureus 8.90 × 10−8 S100A9a
5 rs11829172 12 98,579,287 IL-1b S. aureus 9.63 × 10−8 MIR4303a
6 rs10483241 12 48,630,139 IFN-g C. albicans 9.71 × 10−8 MIR4303a
a

The gene in closest proximity to the cytokine QTL SNPs.

b

Expression of this gene shows association with cytokine QTL SNP in whole blood.