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. 2022 Mar 9;11(3):332. doi: 10.3390/pathogens11030332

Table 3.

Primers used in the present study, detailing its parameters used in the PCR protocol and the expected size of band for the PCR product.

Gene Primer Sequence To (°C) † Expected Length (bp) Reference
COI Cox1_schis’_5′ TCTTTRGATCATAAGCG * 50–46 phase 1; 45 phase 2 1000 Lockyer et al. [46]
Cox1_schis’_3′ TAATGCATMGGAAAAAAACA
CO1F15 TTTNTYTCTTTRGATCATAAGC * 50–46 phase 1; 45 phase 2 600 Brant & Loker [2]
CO1R15 TGAGCWAYHACAAAYCAHGTATC
CO1RH3R internal TAAACCTCAGGATGCCCAAAAAA
28S U178 GCACCCGCTGAAYTTAAG * 55–51 phase 1; 50 phase 2 1500 Lockyer et al. [46], Tkach et al. [47], Olson et al. [48]
L1642 CCAGCGCCATCCATTTTCA
DIG12 internal AAGCATATCACTAAGCGG
ECD2 internal CTTGGTCCGTGTTTCAAGACGGG

† Observable temperature; * Touchdown PCR. The annealing temperature was programmed to reduce to one degree per cycle (50–46 °C; 55–51 °C) for 15 cycles in phase one and a total of 20 cycles in phase two.