Table 2.
Polymorphisms in the AsTLP CDSs of cv. Sarmat and Strelets compared to cv. Ershuizao.
| Gene | NCBI ID cv. Sarmat/cv. Strelets |
cv. Sarmat | cv. Strelets |
|---|---|---|---|
| SNPs (aa Substitution) | |||
| AsTLP7 | OM386716/OM386717 | c.183A>C, c.218G>C (p.G73A), c.219A>C (p.G73A), c.225A>C, c.233A>G (p.N78S), c.243G>C, c.249G>A, c.252T>C, c.276T>C, c.279T>C, c.303A>C, c.333T>C, c.357T>C, c.378C>G, c.384C>T, c.399 >T, c.479>T (p.T160M), c.615C>T | |
| AsTLP16 | OM386718/OM386719 | c.141T>C, c.162T>C, c.406C>T, c.476C>G (p. A159G) | |
| AsTLP20 | OM386720/OM386721 | c.49T>C (p.S17P), c.53G>T (p.C18F), c.67T>C (p.S23P), c.70A>G, c.75A>T, c.184G>C (p.G62R) | |
| c. 670T>C (p.Y224H) | |||
| AsTLP21 | OM386722/OM386723 | c.22A>G, c.141G>A, c.453A>G, c.554G>A, c.570C>T, c.573T>G, c.738A>G, c.804A>T, c.929C>G (p.A310G) | |
| AsTLP23 | OM386724/OM386725 | c.T30>C, c.A45>T (p.Q15H), c.A99>G, c.T147>G, c.C165>G, c.C588>G, c.C684>T, c.C821>G (p. A274G), c.C847>T, c.C849>T, c.T851>C | |
Note: Non-synonymous SNPs and corresponding amino acid substitutions are marked in bold.