TABLE 1.
DNA probes used in this study
Probe | Characteristics of probes
|
|||
---|---|---|---|---|
Plasmidic origin | Probe size (bp) | Restriction sites or primers | Reference | |
Replicon typing | ||||
RepFIC | pULB2440 | 967 | EcoRI-HindIII | 7 |
RepFIIA | pULB2401 | 543 | PstI | 7 |
RepHI1 | pULB2436 | 2,250 | EcoRI-HindIII | 7 |
RepHI2 | pULB2433 | 1,800 | EcoRI | 7 |
RepI1 | pULB2428 | 1,100 | EcoRI-PstI | 7 |
RepP | pULB2420 | 750 | HaeII | 7 |
RepX | pULB2405 | 942 | HindIII | 7 |
Virulence identification | ||||
H6 | pIP1350 | 3,500 | HindIII | 12 |
β-Lactamase determination | ||||
TEM-1/2a | pBR322 | 489 | 5′GAGTACTCACCAGTCACAGAAAAGC3′ | 35 |
5′GACTTCCCGTCGTGTAGATAAC3′ | ||||
PSE-1 | RPL11 | 586 | 5′AATGGCAATCAGCGCTTCCC3′ | 2, 16 |
5′GGGGCTTGATGCTCACTCCA3′ |
Oligonucleotides and probe TEM-1/2 are homologous to TEM-1 and TEM-2 β-lactamases. IEF allowed us to distinguish between both enzymes.