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Predicted La peptide binders docked on HLA-DRB1*0103. (A,B) SMM-align predicted top two peptides ALKKIIEDQQESLNK and EALKKIIEDQQESLN with IC50 values of 49 and 50 were docked onto the crystal structure of HLA-DRB1*0103 PDB structure 1A6A, and the most optimum predicted position of docking is indicated. Both predicted peptides have the same core sequence IIEDQQESL. (C,D) The highlighted region indicates the presence of the peptide in the three-dimensional structure of the La protein.
