Table 15.
Homology of predicted peptides binding to HLA-DRB1*03:01 to bacterial proteins.
| Human Ro52 | LSEDRRQVR | Stigmatella aurantiaca (strain DW4/3-1) | Peptidase, M20 family | 100% |
| Cystobacter fuscus DSM 2262 | Acetylornithine deacetylase | 100% | ||
| Stigmatella aurantiaca (strain DW4/3-1) | Peptidase, M20/M25/M40 family | 100% | ||
| Human Ro52 | LEKDEREQL | Geobacter sp. (strain M21) | Endopeptidase La | 100% |
| Seonamhaeicola marinus | RNA polymerase sigma factor | 100% | ||
| Mouse Ro52 | MEMDLTMQR | Sulfuriferula nivalis | Phytoene synthase | 88.9% |
| Corallococcus exercitus | Phytoene/squalene synthase | 88.9% | ||
| Corallococcus aberystwythensis | Phytoene/squalene synthase | 88.9% | ||
| Corallococcus sp. CA047B | Phytoene/squalene synthase | 88.9% | ||
| Corallococcus exercitus | Phytoene/squalene synthase | 88.9% | ||
| Mouse Ro52 | KELAEKMEM | Arenicella xantha | RNA pol sigma factor | 100% |
| Gamma proteobacterium SS-5 | RNA pol sigma factor | 100% | ||
| Granulosicoccus antarcticus | RNA pol sigma factor | 100% | ||
| Gammaproteobacteria bacterium | RNA pol sigma factor | 100% | ||
| Granulosicoccus sp. | RNA pol sigma factor | 100% | ||
| Candidatus Methyloumidiphilum | RNA pol sigma factor | 100% | ||
| Gammaproteobacteria bacterium | Fumarate flavoprotein | 100% | ||
| Tindallia magadiensis | RNA pol sigma factor | 100% | ||
| Oceanospirillales bacterium | RNA pol sigma factor | 100% | ||
| Cyanobacterium sp. IPPAS | RNA pol sigma factor | 100% | ||
| Cyanobacterium sp. HL-69 | RNA pol sigma factor | 100% | ||
| Culicoidibacter larvae | RNA pol sigma factor | 100% | ||
| Chromobacterium violaceum | RNA pol sigma factor | 100% | ||
| Cyanobacterium stanieri | RNA pol sigma factor | 100% | ||
| Clostridium cellulovorans | RNA pol sigma factor | 100% | ||
| Anaerolineaceae bacterium | RNA pol sigma factor | 100% | ||
| Pseudobythopirellula maris | RNA pol sigma factor | 100% | ||
| Bacteroidetes bacterium | RNA pol sigma factor | 100% | ||
| Epulopiscium sp. | RNA pol sigma factor | 100% | ||
| Betaproteobacteria bacterium | RNA pol sigma factor | 100% | ||
| Fulvivirga imtechensis AK7 | 100% | |||
| Human M3R | AWVISFVLW | Planctomycetes bacterium | Uncharacterized protein | 88.9% |
| Mouse M3R | VLWAPAILF | Desulfobacterales bacterium | Site-2 protease family protein | 88.9% |
| Human La | KEALKKIIE | Candidatus Dojkabacteria bacterium | Uncharacterized protein | 100% |
| Hydrogenimonas sp. | Anthranilate phosphoribosyltransferase | 100% | ||
| candidate division WOR-3 bacterium | Uncharacterized protein | 100% | ||
| Mouse La | QRYWQKILV | Planctomycetes bacterium SM23_25 | Uncharacterized protein | 88.9% |
| Mouse La | ILVDRQAKL | Pseudomonas sp. NFR16 | Uncharacterized | 100.0% |
| Pseudomonas sp. Bc-h | Uncharacterized | 100.0% | ||
| Pseudomonas sp. GV021 | Uncharacterized | 100.0% | ||
| Pseudomonas abietaniphila | Uncharacterized | 100.0% | ||
| Pseudomonas graminis | DUF2914 family | 100.0% | ||
| Pseudomonas graminis | Uncharacterized | 100.0% | ||
| Pseudomonas graminis | Uncharacterized | 100.0% | ||
| Pseudomonas graminis | DUF2914 domain | 100.0% | ||
| Pseudomonas graminis | Uncharacterized | 100.0% | ||
| Pseudomonas sp. | DUF2914 domain | 100.0% | ||
| Pseudomonas sp. NFACC02 | Uncharacterized | 100.0% | ||
| Pseudomonas sp. LP_7_YM | DUF2914 domain | 100.0% | ||
| Pseudomonas sp. M47T1 | Uncharacterized | 100.0% | ||
| Pseudomonas eucalypticola | DUF2914 domain | 100.0% | ||
| Pseudomonas sp. K1S02-6 | DUF2914 domain | 100.0% | ||
| Human/Mouse α-fodrin | FLSDFRDLM | Cocleimonas flava | Uncharacterized | 88.9% |
| Verrucomicrobiales bacterium | Uncharacterized | 88.9% | ||
| Planctomycetaceae bacterium | SH3 domain | 88.9% |