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. 2022 Mar 18;10(3):473. doi: 10.3390/vaccines10030473

Figure 9.

Figure 9

Interactions between Atlantic salmon MHC class II complex and the common epitopes. (A) MHC class II complex of Atlantic salmon; (B) PYYLNLAPNYD epitope docked to MHC class II; (C) QTLEPRLYYLYVP epitope docked to MHC class II; (D) IEGLQRL epitope docked to MHC class II; (E) DEVLARE epitope docked to MHC class II; (F) LNTLGYF epitope docked to MHC class II; (G) LQWMSPLGP epitope docked to MHC class II; (H) EKIDVRGGAAVQYG epitope docked to MHC class II; (I) LKNQDPPTNP epitope docked to MHC class II; (J) LQASALLG epitope docked to MHC class II; (K) WDGNDQNGN epitope docked to MHC class II; (L) LLTQLAQQDP epitope docked to MHC class II; (M) ALQASALVG epitope docked to MHC class II; (N) WDGKL epitope docked to MHC class II; The green domain represents the MHC class II α chain, the cyan domain represents the MHC class II β chain and red peptides for the epitopes. Hydrogen bonds were identified between the epitopes and MHC class II molecules.