eUTOPIA [14]
|
|
|
Bioinformatics |
https://github.com/Greco-Lab/eUTOPIA |
[24], [25], [5], [26], [27], [28], [29], [30]
|
[31], [2], [3]
|
Analytics |
R, Shiny |
|
|
Preprocessing |
INfORM [16]
|
|
|
Bioinformatics |
https://github.com/Greco-Lab/INfORM |
[32], [33], [28], [26], [34]
|
[31], [2], [3], [4], [35]
|
Analytics |
R, Shiny |
|
|
Network Analysis |
VOLTA [36]
|
|
|
Bioinformatics |
https://github.com/fhaive/VOLTA - |
- |
Analytics |
|
Python |
|
|
Network Analysis |
BMDx [10]
|
|
|
Bioinformatics |
https://github.com/Greco-Lab/BMDx |
|
|
Analytics |
R, Shiny |
- |
[4] |
Dose-Responsive |
TinderMIX [12]
|
|
|
Bioinformatics |
https://github.com/grecolab/TinderMIX |
|
|
Analytics |
R |
[5], [23]
|
[4] |
Dose-Responsive |
FunMappOne [15]
|
|
|
Bioinformatics |
https://github.com/Greco-Lab/FunMappOne |
[37], [32], [10], [12], [28],[38], [7], [5], [39],[40], [41], [27], [42]
|
|
Analytics |
R, Shiny |
|
[3], [43]
|
Functional Annotation |
MOSIM [18]
|
|
|
Bioinformatics |
https://doi.org/10.1186/s12859-015-0577-1 |
- |
[44], [4]
|
modelling Simulator |
R |
|
|
|
MVDA [17]
|
|
[47], [48], [49], [44],[50], [51], [52], [53]
|
Bioinformatics |
https://github.com/Greco-Lab/MVDA_package |
|
|
modelling |
R |
[45], [46]
|
[4], [54], [55], [56]
|
Multi-view clustering |
FPRF [19]
|
|
|
Bioinformatics |
https://doi.org/10.1371/journal.pone.0107801.s004 |
|
[57], [58]
|
modelling |
R |
[59], [60], [50], [61]
|
[62], [31], [4]
|
Feature Selection |
GARBO [20]
|
|
|
Bioinformatics |
https://github.com/Greco-Lab/GARBO |
|
|
modelling |
Python |
[63] |
[4] |
Feature Selection |
INSIdE NANO [6]
|
|
|
|
http://inano.biobyte.de/ |
[64], [65]
|
[4], [31], [33]
|
Read-Across |
MaNGA [21]
|
|
|
|
https://github.com/Greco-Lab/MaNGA |
|
|
|
Python |
– |
[4], [31], [66]
|
QSAR |
hyQSAR [22]
|
– |
[4], [31]
|
QSAR |