Table 2.

Relative abundance of super-pathogen bacteria in nasopharyngeal samples from COVID-19 patients.

Bacterial Species	OMS priority	Patients in which the pathogen has been identified	n° patients in which the pathogen represents >10% of total reads	n° patients in which the pathogen represents >5% of total reads	n° patients in which the pathogen represents >2% of total reads
Staphylococcus aureus	High	98%	21	30	34
Klebsiella pneumoniae	Critical	80%	0	2	12
Neisseria gonorrhoeae	High	79%	0	0	5
Streptococcus pneumoniae	Medium	52%	0	0	1
Pseudomonas aeruginosa	Critical	19%	0	0	1
Acinetobacter baumannii	Critical	16%	0	0	1