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. 2022 Mar 9;13:841191. doi: 10.3389/fpls.2022.841191

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Copyright © 2022 Yang, Chen, Zhao, Wang, Li, Yang, Dong, Ma, Zhou, Chen, Wu, Zhang and Liu.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Candidate gene analysis of qPC-1. (A) Local Manhattan plot of GWAS for qPC-1. (B) Linkage disequilibrium (LD) heatmap around the peak. (C,E) The expression of LOC_Os01g49740 in lines with white pericarp (accessions 611 and 689) and red pericarp (accessions 414 and 752) measured using RNA-seq and qRT-PCR, respectively. (D,F) The expression of LOC_Os01g49830 in lines with white and red pericarp measured using RNA-seq and qRT-PCR, respectively.