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. 2022 Mar 9;10:780211. doi: 10.3389/fbioe.2022.780211

TABLE 4.

Creditable force-sensitive lncRNAs and related pathways.

Evidence Samples Force lncRNA Exp Pathway
Liu H. et al. (2019) HiSeq 2000 (Illumina) OCCM-30 CF 70 lncRNAs: 57 upregulated, 13 downregulated KEGG pathway analyses of DEGs: HIF-1, FoxO, mTOR, Notch, and Rap1 signaling pathways
qPCR Prkcz2, Hklos, Trp53cor1, Gdap10, Ak312-ps Up
Hu et al. (2017) Affymetrix GeneChip MC3T3-E1 RWVB 857 lncRNAs: 168 upregulated, 689 downregulated
Bioinformatics qPCR NONMMUT044983 down Ptbp2: CaV1.2 calcium channel transcript
NONMMUT018832 Tnpo1: nuclear translocation of oxytocin receptors
NONMMUT023474 Ext1: BMP signaling
Huang et al. (2019) HiSeq 2000 system (Illumina) hPDLSCs CF 90 lncRNAs: 72 upregulated, 18 downregulated KEGG of DEGs: ECM–receptor interaction, focal adhesion, HIF-1, PI3K/Akt, protein digestion and absorption, and glycolysis/gluconeogenesis
qPCR
FER1L4, HIF1A-AS2, MIAT, NEAT1, ADAMTS9-AS2, LUCAT1 up
MIR31HG, DHFRP1 down
Huang et al. (2021) functional PDLSCs; Mice CF OTM Fer1l4 up AKT/FOXO3
Zhang X. et al. (2019) functional HPDLCs; Rats CF OTM DANCR up miR-34a-5p/DANCR/Jagged1 (Notch signaling pathway)
Li et al. (2017) Illumina HiSeq 2500 Rats HLU 464 lncRNA: 83 upregulated, 381 downregulated
bioinformatics H19 down Dkk4/Wnt/β-catenin signaling; TGF-beta, and tight junction pathways
functional
Wu et al. (2018) functional hBMSCs CTS H19 up H19–miR-138–PTK2(FAK)
Yan et al. (2021) functional U-MSCs to chondrocyte; rats RCCS H19 up RCCS significantly promoted exosome production and exosomal lncRNA H19 at 36 rpm/min within 196 h
Li et al. (2018) functional UMR-106; rats HLU H19 down DNMT1–hypermethylation of H19 promoter–ERK signaling; TGF-β, WNT, and JAK-STAT pathways
Zhang et al. (2018) Affymetrix GeneChip C2C12; Mice HLU lncMUMA down miR-762/MyoD
RPM
Wang M et al. (2020) Microarray functional hBMSCs Topography lncRNA PWRN1-209 up integrin-FAK-ALP signaling
Wang Y et al. (2020) functional MC3T3-E1; Mice HLU ODSM up partially dependent on miR-139-3p/ELK1
Liu et al. (2016) Microarray (Arraystar) human chondrocytes CTS 107 lncRNAs: 51 upregulated, 56 downregulated
functional lncRNA-MSR up miRNA-152/TMSB4
microarray lncRNA-CIR up vimentin
Izadpanahi et al. (2018) bioinformatics hASCs Topography MEG3 up controlled by miR-125b
qPCR
qPCR H19 up BMP signaling
Wang K et al. (2020) functional MC3T3-E1 Clinostat OGRU down miR-320-3p/Hoxa10 axis-Runx2
Mice

CF, compressive force; RWVB, rotating wall vessel bioreactor; OTM, orthodontic tooth movement; HLU, hind limb unloading; CTS, cyclic tensile strain; RCCS, rotary cell culture system; RPM, random positioning machine; hPDLSCs, human/mouse periodontal ligament stem cells; hPDLC, human periodontal ligament cells; hBMSC, human bone marrow-derived stem cells; hADSCs, human adipose tissue-derived stem cells hADSCs, human adipose tissue-derived stem cells.