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. 2022 Mar 10;13:850330. doi: 10.3389/fpls.2022.850330

Table 1.

Penta-primer amplification refractory mutation system (PARMS) single-nucleotide polymorphism (SNP) markers used for fine-mapping of the BnC08.cds gene.

Marker name SNP position Primer
Name Sequence
M1 44,420,751 M1-F AGAAACTTAGAGCATGATTATCGGG
M1-Rg GAAGGTGACCAAGTTCATGCTCGTTTTCAATTTTTTTTTTCATCAG
M1-Ra GAAGGTCGGAGTCAACGGATTCGTTTTCAATTTTTTTTTTCATCAA
M2 46,664,419 M2-F ATAAGATTTGACGAGGTTTGAATG
M2-Rg GAAGGTGACCAAGTTCATGCTTTCATAGATTTTAGAGAAATTAATATTCTG
M2-Ra GAAGGTCGGAGTCAACGGATTTTCATAGATTTTAGAGAAATTAATATTCTA
M3 47,651,192 M3-F GACGGAATCGGATAATCGGAG
M3-Rg GAAGGTGACCAAGTTCATGCTCACGTACGCACCGCTAAATG
M3-Ra GAAGGTCGGAGTCAACGGATTCACGTACGCACCGCTAAATA
M4 48,137,207 M4-F TTGTTTAGGGCTTTAGTTTTTGTGG
M4-Rg GAAGGTGACCAAGTTCATGCTCCAGTCAAGTATCAAGGCGTTGAG
M4-Ra GAAGGTCGGAGTCAACGGATTCCAGTCAAGTATCAAGGCGTTGAA
M5 48,165,304 M5-Fc GAAGGTGACCAAGTTCATGCTTTTGTTGTAAGAAGAATTTGTTGGC
M5-Ft GAAGGTCGGAGTCAACGGATTTTTGTTGTAAGAAGAATTTGTTGGT
M5-R CACCATAGATTGACTTGGACACAGAC
M6 48,394,029 M6-Fc GAAGGTGACCAAGTTCATGCTAATTATTTTCGTTTCATAATGTATACAAAC
M6-Ft GAAGGTCGGAGTCAACGGATTAATTATTTTCGTTTCATAATGTATACAAAT
M6-R ATTATATTTACTAAATAACCATCTTATGCTG
M7 48,444,442 M7-F CTTTAGTGAGAATGTCAGCCTTTTG
M7-Rc GAAGGTGACCAAGTTCATGCTACGTAGAGCATATTGCAGGAAGC
M7-Rt GAAGGTCGGAGTCAACGGATTACGTAGAGCATATTGCAGGAAGT
M8 48,637,321 M8-Fc GAAGGTGACCAAGTTCATGCTGTATGAATACAAATATGTAGTTATATAGAAAAAC
M8-Ft GAAGGTCGGAGTCAACGGATTGTATGAATACAAATATGTAGTTATATAGAAAAAT
M8-R AGAGTGATGAACGAAAAAAACAAG
M9 49,509,367 M9-Fc GAAGGTGACCAAGTTCATGCTAAAAATTTTAGGCAATGATATCCTC
M9-Ft GAAGGTCGGAGTCAACGGATTAAAAATTTTAGGCAATGATATCCTT
M9-R AAAACCTAAAATGATGCAGCTCTAC
M10 50,875,750 M10-Fc GAAGGTGACCAAGTTCATGCTCAGTTGAGAAAATCGGTCGAG
M10-Ft GAAGGTCGGAGTCAACGGATTCAGTTGAGAAAATCGGTCGAA
M10-R CAGAGATAAACTAATCAGACACAGACAG