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. 2022 Mar 10;13:817319. doi: 10.3389/fgene.2022.817319

TABLE 1.

Significant SNPs from linear regression and case-control GWAS. Table displaying information for significant SNPs identified in linear regression EMMAX GWAS with weaning tFEC phenotypes and recessive, dominant or additive inheritance models and case-control EMMAX GWAS with a recessive inheritance model. A, additive; CC, case-control; Chr, chromosome; D, dominant; FDR, false discovery rate; LR, linear regression; MAF, minor allele frequency; PVE, proportion of variance explained; R, recessive.

Model Chr rs Number Position bp P-Value MAF PVE Gene
Unadjusted FDR
LR-R 5 rs405327900 88,129,857 3.34e-08 0.0169 0.3532 0.0539 EDIL3
5 rs413712238 88,154,411 3.34e-08 0.0084 0.3511 0.0539
5 rs417983470 88,160,689 6.66e-08 0.0112 0.3511 0.0516
5 rs416102123 88,144,942 7.82e-08 0.0099 0.3500 0.0511
LR-A 2 rs428768700 14,076,309 1.49e-08 0.0075 0.0214 0.0567 PALM2AKAP2
LR-D 2 rs428768700 14,076,309 1.49e-08 0.0075 0.0214 0.0567 PALM2AKAP2
10 rs417380632 6,660,635 2.32e-07 0.0588 0.3671 0.0475 24 kpb 5′ of PCDH17
CC-R 9 rs416881989 5,046,485 1.01e-08 0.0051 0.4218 0.0580 ADGRB3
9 rs421657777 5,325,635 5.81e-08 0.0147 0.4786 0.0521