TABLE 1.
Genes in the jujube chloroplast genome.
Gene product | Gene product name | Gene name |
1 | Photosystem I | psaA, B, C, I, J, ycf4 |
2 | Photosystem II | psbA, B, C, D, E, F, H, I, J, K, L, M, N, T, Z |
3 | Cytochrome b6/f | petA, Ba, Da, G, L, N |
4 | ATP synthase | atpA, B, E, Fa, H, I |
5 | Rubisco | rbcL |
6 | NADH oxidoreductase | ndhAa, Ba, c, C, D, E, F, G, H, I, J, K |
7 | Ribosomal proteins (LSU) | rpl2a,c, 14, 16a, 20, 22, 23c, 32, 33, 36 |
8 | Ribosomal proteins (SSU) | rps2, 3, 4, 7c, 8, 11, 12a, c, d, 14, 15, 16a, 18, 19c |
9 | RNA polymerase | rpoA, rpoB, rpoC1a, rpoC2 |
10 | Other proteins | accd, ccsa, cemA, clpPb, matK |
11 | Proteins of unknown function | ycf2c, 3b, ycf15c, infAe, ycf1e |
12 | Ribosomal RNAs | rrn4.5c, 5c, 16c, 23c |
13 | Transfer RNAs | trnH(GUG), K(UUU)a, Q(UUG), S(GCU), G(UCC)a, R(UCU), C(GCA), D(GUC), Y(GUA), E(UUC), T(GGU), S(UGA), G(GCC), fM(CAU), S(GGA), T(UGU), L(UAA)a, F(GAA), V(UAC)a, M(CAU), W(CCA), P(UGG), I(CAU)c, L(CAA)c, V(GAC)c, I(GAU)a, c, A(UGC)a,c, R(ACG)c, N(GUU)c, L(UAG) |
aGene containing a single intron;
bGene containing two introns;
cTwo gene copies in the irs;
dGene divided into two independent transcription units;
ePseudogene.