Table 2.
Mean FST values obtained in pairwise comparisons
| Dataset | Group Ia | Group IIa | NM | Geno | FST | p VALUE |
|---|---|---|---|---|---|---|
| IMPUT (imputed after pruning data) | C | B | 123,620 | 188 (84.7) | 0.0009 | 1.6 × 10-2 |
| C | A | 123,620 | 220(84.6) | 0.0012 | 1.7 × 10-5 | |
| A | B | 123,620 | 130 (84.0) | 0.0015 | 1.3 × 10-3 | |
| Outdoor | Indoor | 123,620 | 170 (84.5) | 0.0005 | 9.4 × 10-2 | |
| Dusk | Dawn | 123,620 | 107 (84.5) | 0.0005 | 1.2 × 10-1 | |
| RAW (non-imputed data) | C | B | 15,629 | 92 (34.5) | 0.0008 | 3.5 × 10-3 |
| C | A | 15,629 | 86 (33.2) | 0.0005 | 3.8 × 10-2 | |
| A | B | 15,629 | 50 (32.5) | 0.0027 | 9.8 × 10-4 | |
| Outdoor | Indoor | 15,629 | 67(33.5) | 0.0001 | 3.1 × 10-1 | |
| Dusk | Dawn | 15,629 | 43(33.5) | 0.0001 | 3.4 × 10-1 | |
| C | D | 154,813 | 51 (14.2) | 0.0420 | 1.0 × 10-4 |
Bold values indicate statistically significant p values (p < 0.05)
FST, Fixation index; NM, number of single nucleotide polymorphisms used; Geno, average of non-missing genotypes per marker (% of total markers)
aA, B and C: Locations from Mâncio Lima, Acre at which samples were collected. D: sample location from Loreto, Peru