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. 2022 Mar 29;22:112. doi: 10.1186/s12890-022-01912-4

Table 4.

Symptom duration before admission and distribution of pathogens in lung abscess

Patient ID Age (years) Symptom duration before admission (days) Pathogens identify by mNGS Pathogens identify by Conventional examinations
P1 63 150 Capnocytophaga sputigena; Actinomycetes Actinomycetes
P3 65 30 Nocardia Nocardia
P4 46 210 Porphyromonas endodontalis; Treponema denticola Negative
P8 50 60 Negative Negative
P9 66 90 Negative Negative
P11 33 6 Klebsiella pneumoniae Negative
P14 80 12 Klebsiella pneumoniae Negative
P18 44 20 Staphylococcus aureus Negative
P22 65 700 Porphyromonas endodontalis; Treponema lecithinolyticum; Treponema denticola; Parvimonas micra Negative
P27 71 700 Negative Negative
P28 74 60 Porphyromonas endodontalis;Treponema denticola Negative
P29 47 5 Streptococcus constellatus Negative
P30 44 11 Streptococcus constellatus;Treponema denticola Streptococcus constellatus
P36 56 2 Negative Negative
P39 55 30 Penicillium marneffei Penicillium marneffei
P44 65 120 Fusobacterium nucleatum;Streptococcus constellatus Fusobacterium nucleatum
P45 78 5 Pseudomonas aeruginosa Pseudomonas aeruginosa (MDRO)
P48 54 90 Aspergillus fumigatus (False positive) Negative
P50 78 20 Negative Actinomycetes
P53 60 30 Escherichia coli Negative
P57 63 270 Treponema lecithinolyticum; Parvimonas micra Negative
P60 73 120 Treponema lecithinolyticum; Parvimonas micra Negative
P64 62 15 Streptococcus constellatus; Porphyromonas endodontalis; Parvimonas micra Streptococcus constellatus
P82 58 30 Fusobacterium nucleatum Negative
P84 61 10 Negative Negative
P88 51 7 Klebsiella pneumoniae Negative
P91 42 150 Negative Negative
P97 54 30 Haemophilus influenzae Negative
P99 73 20 Negative Negative
P100 25 1 Negative Negative
P103 62 6 Streptococcus constellatus; Porphyromonas endodontalis Streptococcus constellatus
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