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. 2022 Mar 11;13:837715. doi: 10.3389/fphar.2022.837715

FIGURE 8.

FIGURE 8

Assessment of the quality of pocket alignments constructed with PocketAlign. Alignment quality is evaluated by the root-mean-square deviation (RMSD) calculated over non-hydrogen atoms of binding residues. Target pockets are aligned to binding sites identified in the Protein Data Bank for molecules generated by Pocket2Drug (green) and two baselines, ZINC (red) and vanilla RNN (gray).