TABLE 2.
Basic log2 fold change | Adjusted p-value | Limma-voom fold change | Adjusted p-value | edgeR fold change | Adjusted p-value | |
CHRM1 | −0.2067 | 8.5897E-04 | −0.3310 | 6.044E-05 | −0.8446 | 6.791E-02 |
CHRM2 | −0.7694 | 1.9037E-17 | −1.1010 | 4.462E-21 | −2.3380 | 3.025E-07 |
CHRM3 | 0.1477 | 4.2514E-02 | 0.1046 | 1.902E-01 | 0.09757 | 1.000 |
CHRM4 | −0.4018 | 1.0158E-07 | −0.6219 | 7.594E-11 | −1.8890 | 1.426E-04 |
Log2fc was assessed for CHRM1–4 levels in adenocarcinoma vs. solid normal colorectal tissue samples using basic fold changes, limma-voom, and edgeR normalization, respectively, employing the processing scheme illustrated in Supplementary Figure 1B.