TABLE 3.
Beta coefficient | Standard error | Degrees of freedom | t-value | p-value | |
Intercept | 0.1752 | 0.1303 | 38 | 1.3444 | 0.1868 |
APC levels | 0.2714 | 0.7273E-01 | 38 | 3.7313 | 6.2110E-04 |
Intercept | 1.9058 | 0.3745 | 38 | 5.0886 | 1.0062E-05 |
CTNNB1 levels | −0.1985 | 0.5898E-01 | 38 | −3.3660 | 1.7553E-03 |
Intercept | 0.70369E-01 | 0.1978 | 38 | 0.3558 | 0.7239 |
SMAD4 levels | 0.2415 | 0.8159E-01 | 38 | 2.9597 | 5.2787E-03 |
Univariate linear mixed models with participant id incorporated a random factor generated to model the relationship between CHRM1 and APC, CTNNB1, and SMAD4 levels were statistically significant. FPKM normalized and processed (log2 transformed, low count filtered, quantile normalized, and SVAseq batch corrected) expression levels were used for model generation.