Table 1.
Number | LS-linkeda | Nameb | Modulec | Alternative names | Remarks |
---|---|---|---|---|---|
1 | + | NDUFV1 | N | 51-kDa, Nqo1, NuoF | Contains FMN and N3 |
2 | + | NDUFV2 | N | 24-kDa, Nqo2, NuoE | Contains N1a |
3 | − | NDUFV3d | N | 10-kDa | |
4 | + | NDUFS1 | N | 75-kDa, Nqo3, NuoG | Contains N1b, N4, N5 |
5 | + | NDUFS6 | N | 13-kDa | Contains Zn2+ binding site |
6 | + | NDUFA12 | N | B17.2 | |
7 | + | NDUFS4 | N/Q? | AQDQ, 18-kDa | |
8 | + | NDUFA2 | N/Q? | B8 | Contains thioredoxin fold |
9 | + | NDUFS2 | Q | 49-kDa, Nqo4, NuoCD | |
10 | + | NDUFS3 | Q | 30-kDa, Nqo5, NuoCD | |
11 | + | NDUFS7 | Q | PSST, Nqo6, NuoB | Contains N2 |
12 | + | NDUFS8 | Q | TYKY, Nqo9, NuoI | Contains N6a and N6b |
13 | − | NDUFA5 | Q | B13 | |
14 | − | NDUFA6 | Q | B14 | LYR |
15 | − | NDUFA7 | Q | B14.5a | |
16 | + | NDUFA9 | Q | 39-kDa | Short-chain dehydrogenase/reductase fold with bound NAD(P)H |
17 | − | NDUFAB1 | Q & Pd | SDAP-a, SDAP-b | Acyl carrier protein; 2 copies present; contains phosphopantetheine cofactor |
18 | − | NDUFS5 | Pp | 15-kDa | Quadruple CX9C domain; double CHCH domain |
19 | + | NDUFA1 | Pp | MWFE | STMD |
20 | − | NDUFA3 | Pp | B9 | STMD |
21 | − | NDUFA8 | Pp | PGIV | Quadruple CX9C domain; double CHCH domain |
22 | + | NDUFA10 | Pp | 42-kDa | Nucleoside kinase family |
23 | + | NDUFA11 | Pp | B14.7 | |
24 | + | NDUFA13 | Pp | B16.6 | Identical to GRIM19, STMD |
25 | − | NDUFC1 | Pp | KFYI | STMD |
26 | + | NDUFC2 | Pp | B14.5b | |
27 | +/− | MT-ND1 | Pp | Nqo8, NuoH, ND1 | 8 TMHs |
28 | + | MT-ND2 | Pp | Nqo14, NuoN, ND2 | 11 TMHs |
29 | + | MT-ND3 | Pp | Nqo7, NuoA, ND3 | 3 TMHs |
30 | − | MT-ND4L | Pp | Nqo11, NuoK, ND4L | 3 TMHs |
31 | + | MT-ND6 | Pp | Nqo10, NuoJ, ND6 | 5 TMHs |
32 | − | NDUFB1 | Pd | MNLL | STMD |
33 | − | NDUFB2 | Pd | AGGG | STMD |
34 | − | NDUFB3 | Pd | B12 | STMD |
35 | − | NDUFB4 | Pd | B15 | STMD |
36 | − | NDUFB5 | Pd | SGDH | STMD |
37 | − | NDUFB6 | Pd | B17 | STMD |
38 | − | NDUFB7 | Pd | B18 | Double CX9C domain; double CHCH domain |
39 | + | NDUFB8 | Pd | ASHI | STMD |
40 | − | NDUFB9 | Pd | B22 | LYR |
41 | − | NDUFB10 | Pd | PDSW | |
42 | − | NDUFB11 | Pd | ESSS | STMD |
43 | + | MT-ND4 | Pd | Nqo7, NuoM, ND4 | 14 TMHs |
44 | + | MT-ND5 | Pd | Nqo12, NuoL, ND5 | 16 TMHs |
CHCH = coiled-coil-helix-coiled-coil-helix; FMN = flavin mononucleotide; LYR = member of mitochondrial LYR (LYRM) protein family; N = iron-sulphur cluster; O = for ovine CI; STMD = small single transmembrane domain; TMH = transmembrane helices. Adapted from Guerrero-Castillo et al.,19 Fiedorczuk and Sazanov,20 Adjobo-Hermans et al.,64 and Zhu et al.192
Linked to Leigh syndrome (LS; OMIM #256000; compiled using a literature search and information from: www.omim.org; +/− marks a potential link).
Human protein name according to HGNC (www.genenames.org). Core subunits are highlighted in bold. Subunits encoded by the mtDNA are in italics.
Functional modules: N (NADH binding and oxidation), Q (electron transfer to ubiquinone), P module (consisting of Pp and Pd submodules, proton pumping).
Represents the NDUFV3-10 subunit (10 kDa).