TABLE 1.
Presence of STATs consensus sequence 5′-TTC(N)2-4GAA-3′ in DNA regions of TJ genes. Motif within intron 1 is in bold.
| Gene (accession number) | 5 kb upstream of the first exon | First two introns | 5 kb downstream of the last exon | ||||||
|---|---|---|---|---|---|---|---|---|---|
| N2 spacer | N3 spacer | N4 spacer | N2 spacer | N3 spacer | N4 spacer | N2 spacer | N3 spacer | N4 spacer | |
| CLDN4 (ENST00000435050.1) | TTCAGGAA | TTCCCAGAA | TTCCTTAGAA | — | — | — | TTCTGGAA | — | — |
| TTCCAGAA | |||||||||
| CLDN7 (ENST00000397317.8) | TTCATGAA | — | — | — | TTCACCGAA | TTCGAGGGAA | TTCTGGAA | — | — |
| TTCAAGAA | |||||||||
| CLDN12 (ENST00000400011.6) | TTCTGGGAA | TTCACAGAA | TTCAGAGGAA | TTCTAAGAA | TTCAGAGAA | TTCTTAAGAA | TTCCAGAA | TTCAAGGAA | TTCTATAGAA |
| TTCAAGAA | TTCTAGAA | TTCCCTGAA | TTCTAAAGAA | ||||||
| TTCAGGAA | TTCAATGAA | ||||||||
| TTCTTTGAA | |||||||||
| CLDN15 (ENST00000287916.8) | TTCCTGAA | TTCTAGGAA | — | — | — | — | TTCCAGAA | TTCCCAGAA | — |
| TTCGTTGAA | TTCAGGAA | ||||||||
| TTCGGGGAA | TTCTAGAA | ||||||||
| TJP1 (ENST00000401528.5) | — | TTCGAGGAA | TTCCCGGGAA | TTCCTGAA | TTCTTGGAA | TTCCTACGAA | — | TTCTGAGAA | TTCCAAGGAA |
| TTCAGGAA | TTCTAAGAA | TTCAGCCGAA | |||||||
| TTCCTGAA | TTCTTGGAA | TTCTCCTGAA | |||||||
| TTCATGAA | TTCAGAGAA | TTCGGGAGAA | |||||||
| TTCTTGAA | TTCCAAGAA | TTCAGAGGAA | TTCCTTGGAA | ||||||
| TTCATTGAA | TTCATTGGAA | ||||||||
| TTCACTGAA | TTCATTGGAA | ||||||||
| TTCCTTGAA | |||||||||
| TJP2 (ENST00000377245.9) | TTCATGAATTCCTGAA | TTCCACGAA | TTCTTGAGAATTCCATTGAA | TTCTTGAA | TTCCCTGAA | TTCCAGAGAA | TTCTTGAATTCTTGAATTCCAGAA | TTCTCAGAATTCCTAGAATTCTGGGAA | TTCCTCAGAA |
| TTCATGAA | TTCTTAGAA | TTCGTAGGAA | |||||||
| TTCAAGAA | TTCCATGAA | TTCTTGAGAA | |||||||
| TTCCAGAA | TTCCATGAA | TTCTTTAGAA | |||||||
| TTCTGGAA | TTCGTTGAA | TTCCCAGGAA | |||||||
| TTCCCGAA | TTCTTTGAA | TTCAGTGGAA | |||||||
| TTCCTGAA | TTCTCAGAA | TTCATGGGAA | |||||||
| TTCTCAGAA | TTCAAAGGAA | ||||||||
| TTCAGGGAA | TTCTATGGAA | ||||||||
| TTCATAGAA | TTCACCTGAA | ||||||||
| TTCATTGAA | TTCCTTGGAA | ||||||||
| TTCTATGAA | |||||||||