Table 2.
Variable nucleotide sites in five cpDNA regions of Rumex crispus, R. obtusifolius, R. japonicus and putative hybrids.
| Haplotype | Taxon | Variable nucleotide sites in alignment | ||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| matK | rbcL-accD IGS | trnK-rps16 IGS | ycf6-psbM IGS | psbA-trnH IGS | ||||||||||||||||||||||||||||||||||||||
| 0 5 4 4 |
0 6 3 2 |
1 4 1 1 |
2 4 1 1 |
3 4 1 1 |
4 4 1 1 |
5 4 1 1 |
1 9 2 1 |
6 4 6 1 |
1 9 0 2 |
6 1 2 2 |
1 9 0 3 |
2 9 0 3 |
3 9 0 3 |
4 9 0 3 |
5 9 0 3 |
6 9 0 3 |
3 8 1 3 |
8 1 3 3 |
6 2 3 3 |
6 5 5 3 |
7 5 5 3 |
8 5 5 3 |
9 5 5 3 |
0 6 5 3 |
6 6 7 3 |
8 6 7 3 |
9 6 7 3 |
0 7 7 3 |
1 7 7 3 |
3 7 7 2 |
3 7 7 3 |
4 7 7 3 |
5 7 7 3 |
6 7 7 3 |
3 1 8 3 |
8 1 8 3 |
2 6 8 3 |
4 8 8 3 |
5 0 9 3 |
7 0 9 3 |
||
| C1 | R. crispus, R. japonicus, R. crispus x R. obtusifolius | T | G | – | – | – | – | – | – | G | T | T | – | – | – | – | – | – | T | A | A | C | A | T | T | A | A | – | – | – | – | – | – | – | – | – | A | T | G | T | T | A |
| C2 | R. obtusifolius, R. crispus x R. obtusifolius | T | T | T | T | G | C | G | – | A | T | C | A | T | A | T | G | T | C | G | G | C | A | T | T | A | A | – | – | – | – | – | – | – | – | – | G | – | G | G | T | A |
| C3 | R. crispus, R. crispus x R. obtusifolius | T | T | – | – | – | – | – | – | A | T | C | A | T | A | T | G | T | C | G | G | C | A | T | T | A | C | – | – | – | – | – | – | – | – | – | G | – | G | G | T | A |
| C4 | R. crispus, R. crispus x R. obtusifolius | T | T | – | – | – | – | – | – | A | T | C | A | T | A | T | G | T | C | G | G | C | A | T | T | A | A | – | – | – | – | – | – | – | – | – | G | – | G | G | T | A |
| C5 | R. crispus, R. crispus x R. obtusifolius | A | G | – | – | – | – | – | T | A | G | T | A | T | A | T | G | T | C | G | G | – | – | – | – | – | A | T | G | T | T | A | T | G | A | G | G | – | A | G | G | G |
| C6 | R. japonicus | A | G | – | – | – | – | – | T | A | G | T | A | T | A | T | G | T | C | G | G | C | A | T | T | A | A | T | G | T | T | A | T | G | A | G | G | – | A | G | G | G |