Table 2. Residues surrounding the cavity in MSMEG_0317Δ.
Residues in bold denote those that are conserved in Rv0227c.
| Cavities | Structural elements | Residues surrounding the cavity | Cavity volume (Å3) |
|---|---|---|---|
| Cavity 1 | 340 | ||
| β1; β3 | Thr45, Leu47, Ser49; Leu76, Gln78, Met80 | ||
| β4 | Val95, Thr97, Leu99 | ||
| β5; β6 | Leu112, Leu114, Asp116; Phe175, Phe176, Asp177 | ||
| β7; β8 | Gln181; Gln204 | ||
| β11 | Arg253, Tyr255, Arg259, Phe261 | ||
| β12 | Ser273, Glu275, Gly277, Gln279 | ||
| β13 | Tyr292, Val293, Phe295, Val297 | ||
| α14 | Gln307, Ala310, Glu314 | ||
| Loop 1 | Ile43 | ||
| Loop 6 | Met120, Leu155, His157, Thr161, Tyr162, Arg163 | ||
| Loop 9 | Ile218, Tyr220, Ser221, Tyr224, Asp226, Asp227, Ala228 | ||
| Cavity 2 | 41 | ||
| α2 turn | Leu61 | ||
| α10 turn | Trp239 | ||
| β1 | Phe56 | ||
| β3 | Ile68 | ||
| β13 | Val290, Tyr292 | ||
| β9 | Val232 | ||
| β12 | Tyr281 | ||
| Loop 9 | Ala228, Asp229 | ||
| Loop 3 | Phe66 |