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. 2022 Mar 17;3:836465. doi: 10.3389/falgy.2022.836465

Table 1.

Primer sequences and PCR conditions applied in this study.

Studied exon(s) Primer Product size (bp) Applied enzyme Tm
Primers for PCR 1–2 F: 5' TTGAGGAATAACGGAGGTGAG 3'
R: 5' AGGAGGAGTAGGCTGAGAAAA 3'
1,278 GoTaq 59°C
3 F: 5' GTACTAGCCAAGCAAGTGAGTC 3'
R: 5' AGCAATCGTGCCTATTACATC 3'
1,082 GoTaq 59°C
4 F*: 5' ATACCCTCCATTCCAGCCTGGTC 3'
R*: 5' CTTCACCTGCTCTGCAGTCCATC 3'
368 GoTaq 59°C
5–6 F: 5' CACCATGCCGTATTCACTAA 3'
R: 5' AGGGTGGAAATACAGATGGAAG 3'or
R: 5' TCCCTCCCTACTCATCAAAC 3'
798 GoTaq 59°C
7 F: 5' TCAGTGGTGGAGTCAGGGTA 3'
R: 5' CCAATGGGATAATAGCACCTAC 3'
631 GoTaq 59°C
8 F: 5' CTGCCAGAGGGTACAGTATGT 3'
R: 5' GAGATGGGAGGATTGTTTGA 3'
823 GoTaq 59°C
Primers for sequencing 1–2 F: 5' CCCCGTTCACCCCACCTACCA 3' or
F: 5' TTGAGGAATAACGGAGGTGAG 3'
R*: 5' GCCTGAAGGGTTAATCCTCAGCCA 3'
3 F: 5' TGGTGGTGGTTCTAAGACAGATT 3'
R: 5' AGAGGCATGGCTTTGTAAGTG 3'
4 F*: 5' ATACCCTCCATTCCAGCCTGGTC 3'
R*: 5' CTTCACCTGCTCTGCAGTCCATC 3'
5–6 F: 5' CTCAAATCGTGCTCATGGAA 3'
R: 5' AGGGTGGAAATACAGATGGAAG 3' or
R: 5' TCCCTCCCTACTCATCAAAC 3'
7 F: 5' TCAGTGGTGGAGTCAGGGTA 3'
R: 5' CCAATGGGATAATAGCACCTAC 3'
8 F: 5' GGCAAACAAGGGAAGAGGAAG 3'
R: 5' AGCCTGGGTGACAGATTGAGA 3'
Primers for long PCR 1–3 F: 5' TGCACTGGAGCTGCCTGGTGA 3'
R: 5' AGAGGCATGGCTTTGTAAGTG 3'
2,777 GoTaq 60°C
3–5 F: 5' TGGTGGTGGTTCTAAGACAGATT 3'
R: 5' GGAGGGTTGCTCTAATGCAG 3'
6,676 Phusion Flash 58°C
5–7 F: 5' CACCATGCCGTATTCACTAA 3'
R: 5' CCAATGGGATAATAGCACCTAC 3'
6,209 Phusion Flash 60°C
7–8 F: 5' TCAGTGGTGGAGTCAGGGTA 3'
R: 5' CACAGGGGTCAGAATCACCT 3'
5,289 Phusion Flash 62°C
8 F: 5' GGCAAACAAGGGAAGAGGAAG 3'
R: 5' TGCTAAAAACACCCTCCAAA 3'
6,310 Phusion Flash 60°C
Primers for the verification of exon 7 duplication exon 7 MLPA probe hybridization site F: 5' TACCAGGATCACCAAACTCAGAT 3'
R: 5' CACAATCTGAGTTTGGTGATCCTG 3'
Phusion Flash 64°C
*

Based on primer sequences published in (14).

F, forward; R, reverse.