Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2021 Jun 18;71(2):334–352. doi: 10.1093/sysbio/syab047

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

© The Author(s) 2021. Published by Oxford University Press on behalf of the Society of Systematic Biologists.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

PMC Copyright notice

Figure 4. — (A01 under MSC, shallow tree, ) Posterior probability for the true species tree for phase-resolution strategies D (diploid), P (PHASE), and R (random) plotted against the probability for strategy F (full data). The data are simulated under the MSC models with species trees Shallow B and Shallow U (Fig. 2a,b), with sequences sampled per species. Each plot has 100 scatter points, for the 100 replicate data sets, with the -axis to be the posterior probability for strategy F while the -axis is for strategies D, P, or R. “Low” () and “high” () refer to the mutation rate, and (= 10, 20, 50, 100) is the number of loci. Results for other simulation settings are in Supplementary Figures S1–S3 available on Dryad.

Inline graphic — (A01 under MSC, shallow tree, ) Posterior probability for the true species tree for phase-resolution strategies D (diploid), P (PHASE), and R (random) plotted against the probability for strategy F (full data). The data are simulated under the MSC models with species trees Shallow B and Shallow U (Fig. 2a,b), with sequences sampled per species. Each plot has 100 scatter points, for the 100 replicate data sets, with the -axis to be the posterior probability for strategy F while the -axis is for strategies D, P, or R. “Low” () and “high” () refer to the mutation rate, and (= 10, 20, 50, 100) is the number of loci. Results for other simulation settings are in Supplementary Figures S1–S3 available on Dryad.