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. 2018 Oct 26;21(3):417–431. doi: 10.1093/biostatistics/kxy058

Table 3.

Iowa SHL feasibility study results. Estimated operating characteristics for optimal algorithms based on Inline graphic data sets in each sex/specimen type stratum. The average (Mean) and standard deviation (SD) of the number of tests are provided. Stratum sample sizes Inline graphic are shown. The estimated efficiency (EFF) is the mean number of tests divided by Inline graphic. Accuracy probabilities (1 = CT; 2 = NG) are estimated by averaging over the 5000 data sets

Stratum Algorithm Mean (SD) EFF   Inline graphic Inline graphic Inline graphic Inline graphic Inline graphic Inline graphic Inline graphic Inline graphic
  H2Inline graphic 10907 (130) 0.536   0.891 0.989 0.994 0.996 0.927 0.620 0.991 1.000
Female Swab ATInline graphic 9930 (166) 0.488   0.844 0.989 0.996 0.997 0.938 0.662 0.988 1.000
Inline graphic H3Inline graphic 9815 (170) 0.483   0.844 0.986 0.996 0.997 0.950 0.698 0.988 1.000
  H2Inline graphic 3429 (73) 0.572   0.899 0.876 0.997 0.998 0.969 0.735 0.990 0.999
Female Urine ATInline graphic 3253 (86) 0.542   0.856 0.890 0.998 0.998 0.976 0.779 0.986 0.999
Inline graphic H3Inline graphic 3223 (94) 0.537   0.856 0.851 0.998 0.998 0.978 0.786 0.986 0.999
  H2Inline graphic 1058 (30) 0.815   0.928 0.987 0.990 0.990 0.947 0.839 0.987 0.999
Male Swab ATInline graphic 1044 (44) 0.804   0.895 0.984 0.990 0.990 0.946 0.842 0.980 0.999
Inline graphic H3Inline graphic 1110 (43) 0.855   0.906 0.985 0.991 0.990 0.948 0.844 0.983 0.999
  H2Inline graphic 4726 (66) 0.764   0.960 0.979 0.995 0.998 0.973 0.926 0.993 1.000
Male Urine ATInline graphic 4796 (85) 0.776   0.942 0.980 0.996 0.999 0.978 0.936 0.989 1.000
Inline graphic H3Inline graphic 4942 (94) 0.799   0.944 0.977 0.995 0.998 0.974 0.928 0.990 1.000