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[Preprint]. 2022 Mar 28:2021.10.07.21264644. [Version 2] doi: 10.1101/2021.10.07.21264644

Fig. 2. Phylogenetic analysis and SARS-CoV-2 lineage dynamics in Brazil.

Fig. 2.

(A) Map of Brazil with the number of sequences in GISAID as of 30th June 2021. (B) Temporal sampling of sequences in Brazilian states through time with VOCs highlighted and annotated according to their PANGO lineage assignment. (C) Time resolved maximum likelihood phylogeny containing high qualitynear-full-genome sequences from Brazil (n=3866) obtained from this study, analysed against a backdrop of global reference sequences (n=25,288). Variants under monitoring (VUM) and concern (VOC) are highlighted on the phylogeny. (D) Sources of viral introductions into Brazil characterized as external introductions from the rest of the world. (E) Sources of viral exchanges (imports and exports) in and outside Brazil. (F) Number of viral exchanges within Brazilian regions by counting the state changes from the root to the tips of the phylogeny in panel C.